RSG POSTERS LIST
Updated Nov 17, 2015
Complete list of RSG Poster Abstracts (.pdf) - Click here.
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Poster: P01
Distinct specificities of the androgen and glucocorticoid receptors revealed using feature-based recognition model analysis of SELEX data
Presenting Author: Harmen J. Bussemaker
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Poster: P02
Quantitative modeling of gene expression from sequence, using DNA shape-based model of binding sites
Presenting Author: Pei-Chen Peng
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Poster: P03
Estimating the Number and Diversity of Cancer Mutations In the Overall Population from 5,319 Complete Cancer Genomes
Presenting Author: Ramy Arnaout
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Poster: P04
MiSL: a method for mining synthetic lethal partners of recurrent cancer mutations uncovers novel mutation-specific therapeutic targets
Presenting Author: Subarna Sinha
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Poster: P05
Tracking the Evolution of 3D Gene Organization
Presenting Author: Alon Diament
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Poster: P06
From phenotypic to molecular synergy: A transcriptional study of the dynamics of drug combinations based on single drug responses
Presenting Author: Mehmet Eren Ahsen
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Poster: P07
Three-dimensional analysis of regulatory features reveals functional enhancer-associated loops
Presenting Author: Yao Wang
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Poster: P08
Understanding Breast Cancer Heterogeneity through Personalized Drosophila Models
Presenting Author: Jennifer EL Diaz
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Poster: P09
Creating a library of genome-wide chromatin state patterns during B lymphopoiesis
Presenting Author: Mark Maienschein-Cline
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Poster: P10
Bringing big genomic data into focus for studying complex diseases in specific biological contexts
Presenting Author: Arjun Krishnan
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Poster: P11
Nucleotide Sequence Composition Adjacent to Intronic Splice Sites Improves Splicing Efficiency and Reduces Translation Costs in Fungi
Presenting Author: Zohar Zafrir
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Poster: P12
Multi-omics learning and optimal experimental design for microbial organisms
Presenting Author: Minseung Kim
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Poster: P13
Comparison of Methods to Predict Impact of Regulatory Variants
Presenting Author: Michael Beer
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Poster: P14
High-throughput allele-specific expression across 250 environmental conditions
Presenting Author: Gregory Moyerbrailean
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Poster: P15
Evaluating Genetic Variation Impact on Transcription Factor Binding Sites
Presenting Author: Wenqiang Shi
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Poster: P16
Network model of normal gene expression predicts gene perturbation fold changes
Presenting Author: Sudhir Varma
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Poster: P17
Identifying condition specific transcription factor binding with ATAC-seq
Presenting Author: Roger Pique-Regi
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Poster: P18
An integrative and applicable phylogenetic footprinting framework for cis-regulatory motifs identification in prokaryotic genomes
Presenting Author: Qin Ma
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Poster: P19
The CoGAPS matrix factorization algorithm infers feedback mechanisms from therapeutic inhibition of EGFR that increases expression of growth factor receptors
Presenting Author: Elana J. Fertig
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Poster: P20
A network approach to monitor progression of treatment in tuberculosis
Presenting Author: Awanti Sambarey
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Poster: P21
Epigenetic dysregulation of human myogenesis affects time regulated eRNA and associated transposable element expression
Presenting Author: Loqmane Seridi
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Poster: P22
Characterizing the dynamics of enzyme localization
Presenting Author: Pablo Meyer
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Poster: P23
The Systems Toxicology Computational Challenge: Identification of Exposure Response Markers
Presenting Author: Vincenzo Belcastro
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Poster: P24
E-Flux2 and SPOT: Validated methods for inferring intracellular metabolic flux distributions from transcriptomic data
Presenting Author: Min Kyung Kim
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Poster: P25
SetRank: A highly specific tool for pathway analysis
Presenting Author: Cedric Simillion
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Poster: P26
The role of genome accessibility in transcription factor binding in bacteria
Presenting Author: Antonio Gomes
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Poster: P27
Does the overall shape of gene networks differ between cancer and normal states? Towards a comprehensive understanding of cancer system biology by meta-analysis of various cancer transcriptomes
Presenting Author: Pegah Khosravi
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Poster: P28
Comparative Assessment Suite for Transcription Factor Binding Motifs
Presenting Author: Caleb Kipkurui Kibet
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Poster: P29
Loregic: A method to characterize the cooperative logic of regulatory factors
Presenting Author: Daifeng Wang
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Poster: P30
Affymetrix Probesets as Proxies for Mature MicroRNAs
Presenting Author: Rebecca Tagett
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Poster: P31
Non-coding isoforms of coding genes in B cell development and malignancies
Presenting Author: Irtisha Singh
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Poster: P32
Predicting Metabolic Networks through Pairwise Rational Kernels
Presenting Author: Abiel Roche-Lima
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Poster: P33
Measuring and interpreting similarity between scale-free biological networks
Presenting Author: Bingqing Xie
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Poster: P34
Global Functional Annotation and Visualization of the 2015 Yeast Genetic Interaction Network
Presenting Author: Anastasia Baryshnikova
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Poster: P35
Memory of Inflammation in Regulatory T Cells
Presenting Author: Hyunwoo Cho
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Poster: P36
Enhancing the detection of genomic rearrangements to better understand cancer pathology
Presenting Author: Francesca Cordero
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Poster: P37
In-silico Analysis of Circular RNA as Regulators of miRNA
Presenting Author: Nicholas Akers
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Poster: P38
A parallel negative feedback motif exhibits bidirectional control based on differential kinetics in cytokine regulatory networks
Presenting Author: Warren Anderson
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Poster: P39
Sequence biases in CLIP experimental data are incorporated in protein RNA-binding models
Presenting Author: Yaron Orenstein
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Poster: P40
A novel study of the scope and limitations of baker’s yeast as a model organism for human tissue- specific pathways
Presenting Author: Shahin Mohammadi
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Poster: P41
Deciphering single-cell transcriptional heterogeneity to understand principles of neuronal phenotype organization and plasticity
Presenting Author: James Park
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Poster: P42
microRNA-mediated feed forward disinhibition of multiple functional pathways amplifies prohypertensive signaling
Presenting Author: Danielle DeCicco
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Poster: P43
Prioritizing animal models for human diseases using genome-wide functional networks
Presenting Author: Max Homilius
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Poster: P44
Discovery of bruchid resistance-related variations in regulatory regions by genome-wide sequence comparison
Presenting Author: Chien-Yu Chen
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Poster: P45
Empirical Evidence Supporting a Systematic Approach to Gene Network Identification
Presenting Author: Sweta Sharma
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Poster: P46
Dysregulation of co-regulatory microRNA networks by chronic ethanol consumption leads to impaired liver regeneration.
Presenting Author: Austin Parrish
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Poster: P47
Furthering understanding of Parkinson's Disease through integrative analysis in C. elegans
Presenting Author: Victoria Yao
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Poster: P48
Transcription Network Inference using RNA Expression and Degradation Rate Data in S. cerevisiae
Presenting Author: Konstantine Tchourine
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Poster: P49
The optimized high-throughput siRNA screening : Applications in cancer target discovery
Presenting Author: Nayoung Kim
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Poster: P50
MACE: a web-based application for analyzing mutation-specific drug response and gene expression in cancers
Presenting Author: Yourae Hong
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Poster: P51
Reverse engineering gene regulatory networks from structural and epigenetic datasets
Presenting Author: Brittany Baur
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Poster: P52
Alternative Splicing During Heat Stress in Arabidopsis thaliana
Presenting Author: Gaurav Kandoi
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Poster: P53
An integrated computational pipeline for analysing genetic, molecular, and functional variations in complex diseases.
Presenting Author: Bajuna Salehe
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Poster: P54
Exploration of Breast Cancer Genes and Bioinformatics Analyses
Presenting Author: Shahrzad Eslamian
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Poster: P55
Spectral coherence classification of uORF translation in a neuroblastoma cell model of differentiation
Presenting Author: Sang Chun
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Poster: P56
Transcriptional Regulatory Networks During the Endothelial-to-Hematopoietic Transition in the Mouse Embryo
Presenting Author: Long Gao
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Poster: P57
Dynamic organization and activation of enhancers and super-enhancers dictate effector and memory CD8+ T cell responses
Presenting Author: Bing He
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Poster: P58
Data and Computing Platform to facilitate NCER- PD (National Centre of Excellence in Research on Parkinson’s Disease) Project
Presenting Author: Peter Banda
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Poster: P59
Emergent Topological and Statistical Properties of Gene Regulatory Grids
Presenting Author: Wilberforce Zachary Ouma
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Poster: P60
Integrated Feature Detection From Chromatin State Measurements
Presenting Author: Anastasia Shcherban
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Poster: P61
Identifying sequence-dependent regulators of gene expression from a novel massively parallel reporter assay
Presenting Author: Vincent FitzPatrick
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Poster: P62
Characterization of phased, secondary, small interfering RNAs (phasiRNAs) using Machine Learning
Presenting Author: Parth Patel
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Poster: P63
The transcription factor GABP selectively binds and activates the mutant TERT promoter in cancer
Presenting Author: H. Tomas Rube
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Poster: P64
Charting the human genome’s regulatory landscape with transcription factor binding site predictions
Presenting Author: Xi Chen
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Poster: P65
Deconvolving discriminative sequence features in overlapping categories of TF binding sites
Presenting Author: Akshay Kakumanu
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Poster: P66
Implementation of a Deep Learning Framework to Predict De Novo Anticancer Drug Activity
Presenting Author: Jose Zamalloa
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Poster: P67
Computational Discovery of Transcription Factors Associated with Drug Response
Presenting Author: Casey Hanson
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Poster: P68
Pervasive variation of transcription factor orthologs contributes to regulatory network divergence
Presenting Author: Shilpa Nadimpalli
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Poster: P69
A Novel Experimental Model Sheds Light on the Mechanism of Host-Gut Microbiome Interactions
Presenting Author: Allison Richards
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Poster: P70
Experimentally identified gene-environment interactions contribute to heritability of complex traits
Presenting Author: Cynthia Kalita
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Poster: P71
A systematic survey of the Cys2His2 zinc finger DNA-binding landscape
Presenting Author: Joshua Wetzel
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Poster: P72
Statistical Algorithms for Motif Discovery on SELEX Data
Presenting Author: Chaitanya Rastogi
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Poster: P73
Interpreting non-coding SNPs and quantifying the value of perturbation experiments using ensembles of biophysical models
Presenting Author: Farzaneh Khajouei
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Poster: P74
Tissue context improves disease-gene mining from biomedical text
Presenting Authors: Ruth Dannenfelser and Ran Zhang
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Poster: P75
H3K4me3 downstream of transcription start sites is responsible for transcriptomic modifications in systemic lupus erythematosus
Presenting Author: Zhe Zhang, The Children's Hospital of Philadelphia, United States
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Poster: P76
Coupled dynamics of drug synergy, gene expression, and alternative splicing in combination therapies of breast cancer
Presenting Author: Xintong Chen, Icahn Institute for Genomics and Multiscale Biology, Mount Sinai, United States
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Poster: P77
Spatial-temporal gene regulatory network of maize embryo and endosperm development
Presenting Authors: Wenwei Xiong and Chunguang Du
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Poster: P78
Copy Number Variation Analysis with GROM-RD
Presenting Author: Joseph Kawash, Rutgers University, United States
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Poster: P79
Probabilistic modeling of multiple ChIP-Seq and open chromatin datasets enables discrimination of direct and indirect binding events
Presenting Author: Artur Jaroszewicz, UCLA, United States\